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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs35127597 chr3:124363053 TA/T 4.83E-5 497 37.18 40.05 18.7 KM Plot
KIRC rs35141978 chr2:67576674 A/G 2.23E-7 506 37.37 37.73 2.03 KM Plot
KIRC rs35144434 chr2:67633841 T/C 2.2E-7 507 37.33 37.7 2.03 KM Plot
KIRC rs35147998 chr21:47852085 G/A 4.46E-5 504 37.2 44.3 6.87 KM Plot
KIRC rs35171886 chr7:12400783 C/T 5.16E-5 503 37.6 33.97 14.87 KM Plot
KIRC rs35190747 chr3:48343290 C/T 7.8E-6 502 37.67 37.77 19.13 KM Plot
KIRC rs35236711 chr3:48233201 TA/T 3.27E-5 497 37.67 37.6 21.12 KM Plot
KIRC rs35249036 chr6:26026163 C/G 1.49E-8 503 37.67 37.03 3.37 KM Plot
KIRC rs35285112 chr3:48316877 CGA/C 6.69E-5 491 37.53 37.6 21.12 KM Plot
KIRC rs35297395 chr3:48342882 C/T 7.8E-6 502 37.67 37.77 19.13 KM Plot
KIRC rs35297486 chr3:48378147 T/A 4.16E-5 487 37.5 38.83 22.42 KM Plot
KIRC rs35335639 chr6:26038681 C/G 1.04E-8 506 37.6 36.87 3.37 KM Plot
KIRC rs35340993 chr2:67564966 T/C 2.64E-7 505 37.18 37.67 2.03 KM Plot
KIRC rs35367169 chr6:26040595 G/A 1.19E-8 505 37.6 35.4 3.37 KM Plot
KIRC rs35378061 chr6:26059157 C/A 1.18E-8 503 37.73 33.93 3.37 KM Plot